— function: superpose-with-chain-selection imol1 imol2 chain_imol1 chain_imol2 chain_used_flag_imol1 chain_used_flag_imol2 move_imol2_copy_flag

Where:

• imol1 is an integer number
• imol2 is an integer number
• chain_imol1 is a string
• chain_imol2 is a string
• chain_used_flag_imol1 is an integer number
• chain_used_flag_imol2 is an integer number
• move_imol2_copy_flag is an integer number

chain-based interface to superposition.

Superpose the given chains of imol2 onto imol1. imol1 is reference, we can either move imol2 or copy it to generate a new molecule depending on the vaule of move_imol2_flag (1 for move 0 for copy).